BioPython Tutorial for Bioinformatics | Calculate GC Content of a sequence in a single fasta file
This tutorial shows you how to read a fasta file and calculate the GC content of sequences using the python bioinformatics package, biopython.
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Materials
________________________________________________________________________________________________
How to read fasta files using python
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Manual calculation of GC Content
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Chapters
00:34 Download Data
02:10 Set file path
02:36 Import biopython library
03:16 Read fasta file
03:38 Extract sequence and begin analysis
Commands used
from Bio import SeqIO
SeqIO.parse
Bio.SeqUtils
GC
#Bioinformatics #DataScience #python
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