Bioinformatricks | Merge - Combine VCF files with bcftools tutorial

Published: 15 July 2024
on channel: Bioinformatics Coach

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Bcftools tutorial
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Get the script here:   / 108213503

Example data:https://github.com/vappiah/bioinforma...
Bcftools Manual:https://samtools.github.io/bcftools/b...
How to install bcfools
conda:    • Install BCFTOOLS in Linux using anaco...
build from source:    • How to install BCFTOOLS in any Linux ...
bcftools concat tutorial in detail
bcftools merge tutorial in detail

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Chapters
00:00 Intro
01:14 Combining snps and indels
19:05 Combining chromosome vcf files
33:54 Combining individual sample vcf files

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