Bioinformatricks | Nextflow for RNA Seq Read Count Assignment | Bionformatics Nextflow
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Data Download Script:https://github.com/vappiah/bioinforma...
Supplementary videos:
How to Install conda: • How I install and configure Anaconda ...
How to Install Mamba : • Install , Configure and Run Mamba & ...
Trim_Galore trimming tutorial : • Bioinformatricks - Trim Reads with T...
Star mapping tutorial: • RNA Seq Analysis | Mapping Genome Rea...
Feature count tutorial : • RNA seq Analysis Workflow | From fas...
03:49: Install tools - create a working directory
05:50: create working directory
07:30 download example data
scripting begins
Trimming with trim_galore
Quality Control with fastqc and multiqc
Mapping with STAR
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