Bcftools tutorial | bcftools Split a VCF file into snps and indels

Published: 06 February 2022
on channel: Bioinformatics Coach
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#Bioinformatics #DataScience #Linux #variants

This tutorial shows you how split vcf into snps and indels

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Short video clip:    • Split a VCF file into snps and indels...  

Download the example data here
https://github.com/vappiah/vcf-file-m...
bcftools manual page
https://samtools.github.io/bcftools/b...
1000 genome project ftp site
http://ftp.1000genomes.ebi.ac.uk/vol1...
Install bcftools using anaconda
   • Install BCFTOOLS in Linux using anaco...  
Install bcftools by building from source:
   • How to install BCFTOOLS in any Linux ...  



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