bcftools view | bcftools tutorial on how to count the number of snps and indels in a vcf file
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A step by step procedure to count the number of snps and indels in a vcf file
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Short video clip: • ShortClips | Count the number of snps...
Download the example data here
https://github.com/vappiah/vcf-file-m...
bcftools manual page
https://samtools.github.io/bcftools/b...
1000 genome project ftp site
http://ftp.1000genomes.ebi.ac.uk/vol1...
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• Install BCFTOOLS in Linux using anaco...
Install bcftools by building from source:
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