RAPT, the Read Assembly and Annotation Pipeline Tool, is available as a stand-alone application and on Google Cloud Platform. We now have a pilot web service for RAPT.
Supply short genomic reads for bacterial or archaeal isolates (not metagenomes) and RAPT builds an assembly and gives you an annotated genome, typically within a few hours.
The web service:
https://www.ncbi.nlm.nih.gov/rapt
Stand-alone or GCP RAPT:
https://github.com/ncbi/rapt
Send feedback and questions to:
[email protected]
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